Publications

Multi-targeted priming for genome-wide gene expression assays

Aleksandra B Adomas, Francesc Lopez-Giraldez, Travis A Clark, Zheng Wang & Jeffrey P Townsend


https://doi.org/10.1186/1471-2164-11-477

RNA-Seq methods for transcriptome analysis

Radmila Hrdlickova, Masoud Toloue, Bin Tian


https://doi.org/10.1002/wrna.1364

Evolving gene expression: from G to E to G×E

Andrea Hodgins-Davix, Jeffrey P. Townsend


https://doi.org/10.1016/j.tree.2009.06.011

14 Mating-Type Structure, Function, Regulation and Evolution in the Pezizomycotina

P. S. Dyer, P. Inderbitzin & R. Debuchy


https://doi.org/10.1007/978-3-319-25844-7_14

Global Gene Expression and Focused Knockout Analysis Reveals Genes Associated with Fungal Fruiting Body Development in Neurospora crassa

Zheng Wang, Francesc Lopez-Giraldez, Nina Lehr, Marta Farré, Ralph Common, Frances Trail, Jeffrey P. Townsend


https://doi.org/10.1128/ec.00248-13

The ancestral levels of transcription and the evolution of sexual phenotypes in filamentous fungi

Frances Trail ,Zheng Wang,Kayla Stefanko,Caitlyn Cubba,Jeffrey P. Townsend


https://doi.org/10.1371/journal.pgen.1006867

The Neurospora Transcription Factor ADV-1 Transduces Light Signals and Temporal Information to Control Rhythmic Expression of Genes Involved in Cell Fusion

Rigzin Dekhang, Cheng Wu, Kristina M Smith, Teresa M Lamb, Matthew Peterson, Erin L Bredeweg, Oneida Ibarra, Jillian M Emerson, Nirmala Karunarathna, Anna Lyubetskaya, Elham Azizi, Jennifer M Hurley, Jay C Dunlap, James E Galagan, Michael Freitag, Matthew S Sachs, Deborah Bell-Pedersen


https://doi.org/10.1534/g3.116.034298

Sex-specific gene expression during asexual development of Neurospora crassa

Zheng Wang a, Koryu Kin a, Francesc López-Giráldez a, Hanna Johannesson b, Jeffrey P. Townsend


https://doi.org/10.1016/j.fgb.2012.05.004

Differential impact of nutrition on developmental and metabolic gene expression during fruiting body development in Neurospora crassa

Zheng Wang, Nina Lehr, Frances Trail, Jeffrey P. Townsend


https://doi.org/10.1016/j.fgb.2012.03.004

Genomic and Gene-Expression Comparisons among Phage-Resistant Type-IV Pilus Mutants of Pseudomonas syringae pathovar phaseolicola

Mark Sistrom ,Derek Park,Heath E. O’Brien,Zheng Wang,David S. Guttman,Jeffrey P. Townsend,Paul E. Turner


https://doi.org/10.1371/journal.pone.0144514

Analyses of expressed sequence tags in Neurosporareveal rapid evolution of genes associated with the early stages of sexual reproduction in fungi

Kristiina Nygren, Andreas Wallberg, Nicklas Samils, Jason E Stajich, Jeffrey P Townsend, Magnus Karlsson & Hanna Johannesson


https://doi.org/10.1186/1471-2148-12-229

Chapter 3 - Next-Generation Sequencing: New Tools to Solve Old Challenges

I. Gobernado, A. Sanchez-Herranz, A. Jimenez-Escrig


https://doi.org/10.1016/B978-0-444-62651-6.00003-9